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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11812594 chr10:68711902 C/T DNA2 chr10:70173821-70231878:- -0.44 -5.97 5.46E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T HERC4 chr10:69681656-69835105:- -0.63 -6.1 2.53E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T KIAA1279 chr10:70748487-70776738:+ -0.65 -6.13 2.22E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T MRPS16 chr10:75008601-75012451:- -0.63 -6.06 3.18E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T MYST4 chr10:76586379-76792639:+ -0.49 -6.11 2.38E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T POLR3A chr10:79729009-79789303:- -0.56 -6.41 4.37E-10 Box Plot
BLCA rs11812594 chr10:68711902 C/T SAR1A chr10:71907045-71930279:- -0.72 -6.97 1.39E-11 Box Plot
BLCA rs11812594 chr10:68711902 C/T SEC24C chr10:75504142-75531919:+ -0.69 -5.97 5.41E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T SUPV3L1 chr10:70939988-70968855:+ -0.78 -7.27 2.02E-12 Box Plot
BLCA rs11812594 chr10:68711902 C/T TRUB1 chr10:116697952-116737435:+ -0.48 -5.96 5.84E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T VDAC2 chr10:76969912-76991206:+ -0.55 -6.06 3.19E-9 Box Plot
BLCA rs11812594 chr10:68711902 C/T VPS26A chr10:70883268-70932617:+ -0.7 -6.96 1.45E-11 Box Plot
BLCA rs11812594 chr10:68711902 C/T VTI1A chr10:114206756-114578503:+ -0.7 -6.05 3.53E-9 Box Plot
BLCA rs11821455 chr11:104019006 A/G RNF26 chr11:119205237-119208023:+ 0.76 6.42 4.13E-10 Box Plot
BLCA rs11824648 chr11:117887812 C/G NFRKB chr11:129733531-129765485:- 0.66 6.4 4.44E-10 Box Plot